Showing the last 30 topics from:

TopicRepliesViewsActivity
RESCRIPt 'get-ncbi-genomes' and 'get-ncbi-data-protein' functions not supported?354Thu Feb 19 2026
"over-classification" of ASV taxonomy?378Fri Jan 09 2026
Evaluate custom taxonomic classifier with RESCRIPt?6143Thu Nov 27 2025
Error when using qiime taxa barplot after fragment-insertion9108Wed Aug 13 2025
Greengenes2 and RESCRIPt3141Wed Jul 09 2025
SILVA 138.1 classifier trained on version 2023.5 and used in 2024.53239Thu Jul 03 2025
vsearch unrecognized option '--qseqout'457Tue Jul 01 2025
Dealing with Poor Taxonomic Assignments7156Tue Jun 24 2025
Processing, filtering, and evaluating the SILVA database (and other reference sequence data) with RESCRIPt2665354Mon Jun 23 2025
mismatch between taxonomy and sequence data that download from NCBI using qiime rescript get-ncbi-data458Mon May 19 2025
RESCRIPt GTDB 226.03157Mon May 05 2025
Almost all Reads are unclassified - custom 18S V4 classifier13242Fri Apr 25 2025
Assigning Taxonomy with the Silva Classifier6260Wed Mar 05 2025
Contents of imported database687Tue Mar 18 2025
Filtering eukaryotes from SILVA database4134Fri Jan 17 2025
RESCRIPT: species information in GTDB596Mon Jan 13 2025
How to train a GTDB SSU classifier using RESCRIPt52548Mon Jan 13 2025
Merging Custom Reference Sequences with rescript reference database266Wed Dec 11 2024
...temporary files that no longer exist.561Tue Dec 03 2024
How to train a UNITE classifier using RESCRIPt112232Fri Jan 03 2025
Using RESCRIPt to compile sequence databases and taxonomy classifiers from NCBI Genbank815288Tue Oct 22 2024
Sequences not retrieved via Rescript372Mon Sep 09 2024
Training silva classifiers based on NCBI taxonomy1285Thu Oct 03 2024
RESCRIPt issue for --p-query retriving data from NCBI: No sequences for given query4105Wed Oct 02 2024
qiime feature-classifier classify-sklearn low confidence despite 100% identity2135Wed Aug 21 2024
Manually Adding Positive Controls to classifier or reference database4524Fri Aug 30 2024
problem training taxonomic Naive Bayes classifier with SILVA database8949Thu Jul 11 2024
Rescript to Train Silva Naive Bayes classifier for 16S data6336Wed Jul 10 2024
Snakemake pipelines for generating taxonomy classifiers7463Thu Jul 25 2024
12s database using rescript - australian taxa only?7276Thu Jun 06 2024